libpappsomspp (0.8.15-1build1) hirsute; urgency=medium

  * No-change rebuild for alglib soname change.

 -- Matthias Klose <doko@ubuntu.com>  Fri, 08 Jan 2021 15:38:15 +0100

libpappsomspp (0.8.15-1) unstable; urgency=low

  * New upstream version depending on libodsstream 0.7.11.

  * Disable make test for the moment.

 -- Filippo Rusconi <lopippo@debian.org>  Mon, 21 Dec 2020 18:05:07 +0100

libpappsomspp (0.8.14-1~buster+1) buster; urgency=medium

  * catch2 test suite is working
  * fix for standard exception compatibility

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 16 Dec 2020 14:00:13 +0100

libpappsomspp (0.8.13-1~buster+1) buster; urgency=medium

  * buster package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 09 Dec 2020 15:36:32 +0100

libpappsomspp (0.8.13-1) unstable; urgency=low

  * New upstream with improvement in the XIC widgets.

 -- Filippo Rusconi <lopippo@debian.org>  Tue, 08 Dec 2020 16:29:03 +0100

libpappsomspp (0.8.12-1) UNRELEASED; urgency=low

  * New upstream version with new tests imported from mineXpert2
    (Catch2-based).

  * See below for changes between 0.8.8 and now.

 -- Filippo Rusconi <lopippo@debian.org>  Wed, 02 Dec 2020 14:28:10 +0100

libpappsomspp (0.8.11-1~buster+1) buster; urgency=medium

  * test added
  * bug fix in chargeDeconvolution filter
  * including catch2 framework

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 24 Nov 2020 10:08:59 +0100

libpappsomspp (0.8.10-1~buster+1) buster; urgency=medium

  * better tandemrun wrapper
  * better FilterSuiteString

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 18 Nov 2020 10:13:20 +0100

libpappsomspp (0.8.9-1~buster+1) buster; urgency=medium

  * rewritten TimsTOF mz calibration API
  * new FilterNameInterface to build Filter with strings
  * Thomas Renne added in the copyright debian notice

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 17 Nov 2020 13:31:57 +0100

libpappsomspp (0.8.8-1~buster+1) buster; urgency=medium

  * autoremove directory created for tandem run wrapper

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 02 Nov 2020 10:50:32 +0100

libpappsomspp (0.8.8-1) unstable; urgency=low

  * Add the possibility to recalculate the x,y,z axis scale to log10 or
    linear.

 -- Filippo Rusconi <lopippo@debian.org>  Wed, 21 Oct 2020 14:29:32 +0200

libpappsomspp (0.8.7-1~buster+1) buster; urgency=medium

  * make new builtin centroid interface available throught
    TimsMsRunReader
  * access to the underlying timdata pointer from TimsMsRunReader

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 15 Oct 2020 09:14:24 +0200

libpappsomspp (0.8.6-1~buster+1) buster; urgency=medium

  * builtin centroid for timsdata

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 14 Oct 2020 10:22:37 +0200

libpappsomspp (0.8.5-1~buster+1) buster; urgency=medium

  * more checks on file permissions for tandem run wrapper
  * charge deconvolution documented

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 09 Oct 2020 15:37:09 +0200

libpappsomspp (0.8.4-1~buster+1) buster; urgency=medium

  * new charge deconvolution filter

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 08 Oct 2020 10:52:40 +0200

libpappsomspp (0.8.3-1~buster+1) buster; urgency=medium

  * better msrunreader error messages
  * regorganised xic extractor to ensure that device is released

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 05 Oct 2020 10:19:53 +0200

libpappsomspp (0.8.2-1) buster; urgency=low

  [ Filippo Rusconi ]
  * Fixes in the minus combiners.

 -- Filippo Rusconi <lopippo@debian.org>  Wed, 23 Sep 2020 15:22:50 +0200

libpappsomspp (0.8.2-1~buster+1) buster; urgency=medium

  * msrunreader new api to release/acquire file pointers

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 25 Sep 2020 15:07:16 +0200

libpappsomspp (0.8.1-1) unstable; urgency=low

  * Fix bug due to not testing pointer against nullptr.

 -- Filippo Rusconi <lopippo@debian.org>  Mon, 21 Sep 2020 17:20:31 +0200

libpappsomspp (0.8.0-1) UNRELEASED; urgency=low

  * Add MSn support.

 -- Filippo Rusconi <lopippo@debian.org>  Mon, 21 Sep 2020 15:53:13 +0200

libpappsomspp (0.7.15-1) unstable; urgency=low

  * Attempt at fixing the test/test_massrange.cpp failure in i386 platforms.

 -- Filippo Rusconi <lopippo@debian.org>  Thu, 10 Sep 2020 18:07:48 +0200

libpappsomspp (0.7.14-1) unstable; urgency=low

  * Bug fix in DataPoint initialization using initialize().

 -- Filippo Rusconi <lopippo@debian.org>  Wed, 02 Sep 2020 10:23:48 +0200

libpappsomspp (0.7.14-1~buster+1) buster; urgency=medium

  * new filters : FilterComplementIonEnhancer, FilterGreatestYperWindow,
    FilterRemoveC13

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 27 Aug 2020 10:36:53 +0200

libpappsomspp (0.7.13-1) unstable; urgency=low

  * Another set of fixes for the faulty hard-coded path
    to the arch-specific system library directory.

 -- Filippo Rusconi <lopippo@debian.org>  Tue, 25 Aug 2020 13:13:48 +0200

libpappsomspp (0.7.12-1) unstable; urgency=low

  * Add new filter.

 -- Filippo Rusconi <lopippo@debian.org>  Mon, 24 Aug 2020 19:42:19 +0200

libpappsomspp (0.7.11-1) unstable; urgency=low

  * Fix problem with the shipped CMake-based config module file
    that was replaced with a find module file that has no
    path hard-coded in it. This should fix the failed builds on
    all the non x86_64 platforms.

 -- Filippo Rusconi <lopippo@debian.org>  Mon, 24 Aug 2020 15:45:21 +0200

libpappsomspp (0.7.11-1~buster+1) buster; urgency=medium

  * fix MassSpectrumWidget issue #3

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 17 Aug 2020 15:52:06 +0200

libpappsomspp (0.7.10-1~buster+1) buster; urgency=medium

  * buster package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 22 Jul 2020 11:04:12 +0200

libpappsomspp (0.7.10-1) unstable; urgency=low

  * New upstream version. Added new widget class to represent mass data
    to a TIC|XIC chromatogram / drift spectrum color map as requested 
    by a user.

  * Updates to the packaging.

 -- Filippo Rusconi <lopippo@debian.org>  Thu, 09 Jul 2020 09:26:14 +0200

libpappsomspp (0.7.9-1~buster+1) buster; urgency=medium

  * new version for debian buster pappsodev

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 01 Jul 2020 18:49:18 +0200

libpappsomspp (0.7.8-1~buster+1) buster; urgency=medium

  * Debian buster backport

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 10 Jun 2020 17:04:05 +0200

libpappsomspp (0.7.8-1) unstable; urgency=low

  * New upstream that has the src/custompwiz source directory
    removed. This lib now build-depends on another package: 
    libpwizlite-dev.

  * d/copyright was updated to reflect the removal of the pwiz code 
    subset. Note that 3 files were kept, modified and relocated to
    the pappsomspp source tree. These were documented in d/copyright.

 -- Filippo Rusconi <lopippo@debian.org>  Thu, 04 Jun 2020 18:21:53 +0200

libpappsomspp (0.7.7-2) buster; urgency=medium

  * packaging problem fixed

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 19 May 2020 15:47:42 +0200

libpappsomspp (0.7.7-1) buster; urgency=medium

  * a lot of warnings fixed, better virtual destructors

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 18 May 2020 10:31:35 +0200

libpappsomspp (0.7.6-1) UNRELEASED; urgency=low

  * Fixes for the CMake build system.

 -- Filippo Rusconi <lopippo@debian.org>  Tue, 28 Apr 2020 18:03:15 +0200

libpappsomspp (0.7.5-1) unstable; urgency=low

  * New upstream version with fixex for Qt5 suffix 
    remnants within CMake stuff. Also, use better 
    name for the libs in the CMake dialect 
    (PAPPSOMSPP becomes PappsoMSpp).
  
 -- Filippo Rusconi <lopippo@debian.org>  Tue, 28 Apr 2020 16:35:52 +0200

libpappsomspp (0.7.4-1) unstable; urgency=low

  * New upstream version with MultiArch support.

  * General review of the packaging for Debian official repos upload.
 
  * Full copyright holders info in d/copyright.

 -- Filippo Rusconi <lopippo@debian.org>  Wed, 22 Apr 2020 10:14:26 +0200

libpappsomspp (0.7.3-2) buster; urgency=medium

  * no more global include directories in cmake to fix compilation
    problems

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 20 Apr 2020 09:08:55 +0200

libpappsomspp (0.7.3-1) buster; urgency=medium

  * new system to export symbols for Windows system
  * filter pseudo centroid

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 15 Apr 2020 08:02:58 +0200

libpappsomspp (0.7.2-3) buster; urgency=medium

  * important fix in timsframe polynomial resolution

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sun, 12 Apr 2020 16:57:34 +0200

libpappsomspp (0.7.2-2) buster; urgency=medium

  * fix pappsomsconfig generation and install

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 10 Apr 2020 19:36:54 +0200

libpappsomspp (0.7.2-1) buster; urgency=medium

  * reworked cmake stuff

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 10 Apr 2020 10:26:45 +0200

libpappsomspp (0.7.1-1) buster; urgency=medium

  * brand new library, including libpwiz to avoid compilation problems

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 08 Apr 2020 18:26:53 +0200

libpappsomspp (0.7.0-1) unstable; urgency=low

  * New packaging for testing Debian sid package creation.

 -- Filippo Rusconi <lopippo@debian.org>  Sat, 18 Jan 2020 21:05:02 +0100

libpappsomspp (0.6.5-1ubuntu1) bionic; urgency=medium

  * ubuntu 18.04 package 

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 10 Jan 2020 21:59:22 +0000

libpappsomspp (0.6.5-1) buster; urgency=medium

  * catch pwiz runtime error
  * set scans number for mzXML files

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 08 Jan 2020 20:50:05 +0100

libpappsomspp (0.6.4-1) buster; urgency=medium

  * a lot of development from Filippo Rusconi and Olivier Langella

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 19 Dec 2019 21:55:55 +0100

libpappsomspp (0.6.3-2) buster; urgency=medium

  * buster package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 12 Sep 2019 15:23:58 +0200

libpappsomspp (0.6.3-1) stretch; urgency=medium

  * better BaseTracePlotWidget
  * new callback function to cancel msrunreader operation
  * new set of objects to handle Bruker's Tims TOF raw data natively
  * new MsRunReaders for Bruker's Tims TOF raw data (incomplete)

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 11 Sep 2019 09:57:57 +0200

libpappsomspp (0.6.2-1) buster; urgency=medium

  * first buster package
  * new BaseTracePlotWidget designed by Filippo Rusconi
  * FastaFileIndexer object
  * new function hasScanNumbers to know if an MSrun file can be accessed using scan numbers
    (true with Thermo, false with others)
  * peptide palindrome test
  * new code to compute natural isotope average
  * new constructor Trace(const MapTrace &map_trace) to build directly a Trace from MapTrace

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 16 Jul 2019 14:23:52 +0200

libpappsomspp (0.6.1-1) stretch; urgency=medium

  * huge refactoring with Filippo Rusconi
  * work in progress to define a tree structure and browse MS runs
  * new object and API to align MS runs using the MS2 method

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sat, 08 Jun 2019 19:29:09 +0200

libpappsomspp (0.6.0-1) stretch; urgency=medium

  * huge refactoring with Filippo Rusconi
  * all filters now available on a Trace object with a simple interface
  * peak detection as a new simple interface that can be used on any Trace
  * new feature to combine several traces or mass spectrum
  * mass spectrum scan numbers are deprecated in favor of a simple index of the scan
  * a new msfile accessor is available to handle multiple ms runs into a single file

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 23 May 2019 11:00:11 +0200

libpappsomspp (0.5.1-1) stretch; urgency=medium

  * better packaging
  * mutation support

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sat, 23 Mar 2019 07:27:31 +0100

libpappsomspp (0.5.0-1) stretch; urgency=medium

  * library entirely refactored with Filippo Rusconi
  * better documentation
  * coding standards available

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 06 Feb 2019 10:27:13 +0100

libpappsomspp (0.4.5-1) stretch; urgency=medium

  * new package with graphical bug fix

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 08 Jan 2019 15:49:32 +0100

libpappsomspp (0.4.4-5) stretch; urgency=medium

  * new pwiz library

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 02 Jan 2019 21:24:24 +0100

libpappsomspp (0.4.4-3) stretch; urgency=medium

  * new qcustomplot library 2.0.1

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 11 Dec 2018 19:07:06 +0100

libpappsomspp (0.4.4-1) unstable; urgency=low

  * Packaging for first upload to the NEW queue.

 -- Filippo Rusconi <lopippo@debian.org>  Tue, 11 Dec 2018 11:06:34 +0100

libpappsomspp (0.4.3-2) stretch; urgency=medium

  * fix MGF precursor scan num empty

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 02 Nov 2018 13:44:50 +0100

libpappsomspp (0.4.3-1) stretch; urgency=medium

  * new buffered XIC reader based on pwiz library

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 14 Aug 2018 14:27:31 +0200

libpappsomspp (0.4.2-1) stretch; urgency=medium

  * new API to read MSrun data

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sat, 02 Jun 2018 07:12:31 +0200

libpappsomspp (0.4.1-1) stretch; urgency=medium

  * new xic extractor based on slices and having a read buffer

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 24 May 2018 19:24:13 +0200

libpappsomspp (0.4.0-2) stretch; urgency=medium

  * fix out of range problem

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 17 May 2018 22:01:40 +0200

libpappsomspp (0.4.0-1) stretch; urgency=medium

  * new XIC extractor API and new dependency to proteowizard library

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 16 May 2018 09:34:30 +0200

libpappsomspp (0.3.4-1) stretch; urgency=medium

  * API to draw peak borders

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sat, 14 Apr 2018 17:29:13 +0200

libpappsomspp (0.3.3-3) stretch; urgency=medium

  * fix cmake config module

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 12 Feb 2018 09:13:16 +0100

libpappsomspp (0.3.3-2) stretch; urgency=medium

  * using new libodsstream package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sun, 11 Feb 2018 16:54:30 +0100

libpappsomspp (0.3.3-1) stretch; urgency=medium

  * better widgets

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 09 Feb 2018 15:57:58 +0100

libpappsomspp (0.3.2-1) stretch; urgency=medium

  * new XIC widget

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 18 Jan 2018 15:54:09 +0100

libpappsomspp (0.3.1-1) stretch; urgency=medium

  * new precision widget, better spectrum widget

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 10 Jan 2018 14:06:33 +0100

libpappsomspp (0.3.0-3) stretch; urgency=medium

  * avoid unneeded computations

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 03 Jan 2018 09:10:46 +0100

libpappsomspp (0.3.0-2) stretch; urgency=medium

  * isotope number instead of level

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 02 Jan 2018 17:00:11 +0100

libpappsomspp (0.3.0-1) stretch; urgency=medium

  * new PAPPSO widget package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 02 Jan 2018 10:48:10 +0100

libpappsomspp (0.2.40-1) stretch; urgency=medium

  * faster grouping algorithm, refactoring

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sun, 17 Dec 2017 14:05:18 +0100

libpappsomspp (0.2.39-1) stretch; urgency=medium

  * better perf in grouping algorithm

 -- Olivier Langella <olivier.langella@u-psud.fr>  Fri, 15 Dec 2017 10:06:14 +0100

libpappsomspp (0.2.38-1) stretch; urgency=medium

  * centos7 compilation
  * fixed spectrum unique
  * better grouping performance

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sat, 21 Oct 2017 10:44:30 +0200

libpappsomspp (0.2.37-1) stretch; urgency=medium

  * new API for amino acid widlcards, new spectrum functions

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 18 Sep 2017 10:29:48 +0200

libpappsomspp (0.2.36-1) stretch; urgency=medium

  * new peptide functions

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 20 Jun 2017 21:53:35 +0200

libpappsomspp (0.2.35-1~stretch) stretch; urgency=medium

  * stretch pakage

 -- Olivier Langella <olivier.langella@u-psud.fr>  Thu, 11 May 2017 15:02:25 +0200

libpappsomspp (0.2.35-1) jessie; urgency=medium

  * new grouping API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 26 Apr 2017 21:17:09 +0200

libpappsomspp (0.2.34-1) jessie; urgency=medium

  * new peptides API to handle modification removal

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 24 Apr 2017 09:03:01 +0200

libpappsomspp (0.2.33-1~stretch) stretch; urgency=medium

  * stretch package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Tue, 18 Apr 2017 19:13:29 +0200

libpappsomspp (0.2.33-1) jessie; urgency=medium

  * better grouping, contaminant handler modified

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Tue, 18 Apr 2017 11:17:20 +0200

libpappsomspp (0.2.32-3~stretch) stretch; urgency=medium

  * stretch package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Sat, 18 Mar 2017 13:50:48 +0100

libpappsomspp (0.2.32-3) jessie; urgency=medium

  * better intensity ratio isotope determination

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 21 Jan 2017 12:13:24 +0100

libpappsomspp (0.2.32-2) stretch; urgency=medium

  * stretch package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Wed, 21 Dec 2016 21:43:27 +0100

libpappsomspp (0.2.32-1) jessie; urgency=medium

  * better spectrum API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Tue, 20 Dec 2016 17:01:04 +0100

libpappsomspp (0.2.31-2) stretch; urgency=medium

  * stretch package

 -- Olivier Langella <olivier.langella@u-psud.fr>  Mon, 19 Dec 2016 18:45:14 +0100

libpappsomspp (0.2.31-1) jessie; urgency=medium

  * new modification replacer in digestion API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 07 Dec 2016 13:43:48 +0100

libpappsomspp (0.2.30-2) jessie; urgency=medium

  * digestion bug fixed

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 14 Nov 2016 21:52:40 +0100

libpappsomspp (0.2.30-1) jessie; urgency=medium

  * new digestion API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 19 Oct 2016 21:50:47 +0200

libpappsomspp (0.2.29-1) jessie; urgency=medium

  * new peptide digestion pipeline

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Tue, 13 Sep 2016 13:55:11 +0200

libpappsomspp (0.2.28-1) jessie; urgency=medium

  * don't handle xic sink pointer lifetime

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Tue, 30 Aug 2016 17:12:30 +0200

libpappsomspp (0.2.27-1) jessie; urgency=medium

  * new ion types

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 25 Aug 2016 07:48:16 +0200

libpappsomspp (0.2.26-1) jessie; urgency=medium

  * new features in xtandem hyperscore computations

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Tue, 23 Aug 2016 10:06:12 +0200

libpappsomspp (0.2.25-1) jessie; urgency=medium

  * improving spectrum process for tandem hyperscore computation

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 19 Aug 2016 10:54:19 +0200

libpappsomspp (0.2.24-1) jessie; urgency=medium

  * new API to digest protein, new documentation

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 15 Jul 2016 16:01:40 +0200

libpappsomspp (0.2.23-1) jessie; urgency=medium

  * formula one

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sun, 03 Jul 2016 23:20:42 +0200

libpappsomspp (0.2.22-1) jessie; urgency=medium

  * XML id added in msrun

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 25 Jun 2016 17:34:19 +0200

libpappsomspp (0.2.21-1) jessie; urgency=medium

  * computing PSI OBO modification masses using the diff formula

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 24 Jun 2016 21:53:34 +0200

libpappsomspp (0.2.20-1) jessie; urgency=medium

  * compute amino acid mass using the chemical formula

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 22 Jun 2016 21:47:53 +0200

libpappsomspp (0.2.19-1) jessie; urgency=medium

  * proton vs protium bug fixed

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 22 Jun 2016 16:25:05 +0200

libpappsomspp (0.2.18-1) jessie; urgency=medium

  * disctinction between proton and protium mass

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 22 Jun 2016 15:34:14 +0200

libpappsomspp (0.2.17-1) jessie; urgency=medium

  * amino acid precision goes now to 4 digits instead of previous 3
    digits

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 22 Jun 2016 13:48:34 +0200

libpappsomspp (0.2.16-1) jessie; urgency=medium

  * new syntax to limit modifications per site

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sun, 12 Jun 2016 08:12:44 +0200

libpappsomspp (0.2.15-1) jessie; urgency=medium

  * new API to build peptide modification pipeline from strings

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 11 Jun 2016 22:15:09 +0200

libpappsomspp (0.2.14-1) jessie; urgency=medium

  * final fix into massrange

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 20 May 2016 22:31:50 +0200

libpappsomspp (0.2.13-1) jessie; urgency=medium

  * bug fix on PAPPSO mass range build with upper and lower precision

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 18 May 2016 15:25:20 +0200

libpappsomspp (0.2.12-1) jessie; urgency=medium

  * construct MassRange with upper and lower precisions

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 02 May 2016 16:40:31 +0200

libpappsomspp (0.2.11-1) jessie; urgency=medium

  * get highest and lowest mass of MassRange

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 28 Apr 2016 15:14:20 +0200

libpappsomspp (0.2.10-1) jessie; urgency=medium

  * peptide modification API modified, new Xic MS point distance
    function added

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 09 Apr 2016 22:52:33 +0200

libpappsomspp (0.2.9-1) jessie; urgency=medium

  * copy constructor bug fixed in Xic isotope

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 17 Mar 2016 08:46:10 +0100

libpappsomspp (0.2.8-2) jessie; urgency=medium

  * copy constructor added

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 14 Mar 2016 21:18:37 +0100

libpappsomspp (0.2.8-1) jessie; urgency=medium

  * Precision pointers, xic detection methods

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 10 Mar 2016 12:13:15 +0100

libpappsomspp (0.2.7-1) jessie; urgency=medium

  * combinations cached
  * parsing PSI MOD istope labels
  * semi tryptic digestion

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 08 Feb 2016 09:06:57 +0100

libpappsomspp (0.2.6-2) jessie; urgency=medium

  * unneeded move constructor removed

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 14 Dec 2015 22:26:54 +0100

libpappsomspp (0.2.6-1) jessie; urgency=medium

  * get ion list

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 28 Nov 2015 23:05:36 +0100

libpappsomspp (0.2.5-2) jessie; urgency=medium

  * make shared pointer on ion fragment list

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 28 Nov 2015 08:41:47 +0100

libpappsomspp (0.2.5-1) jessie; urgency=medium

  * new peptide functions

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 21 Nov 2015 15:08:43 +0100

libpappsomspp (0.2.4-2) jessie; urgency=medium

  * symbols update

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 07 Nov 2015 21:15:46 +0100

libpappsomspp (0.2.4-1) jessie; urgency=medium

  * better protein API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 07 Nov 2015 15:29:19 +0100

libpappsomspp (0.2.3-1) jessie; urgency=medium

  * avoid resource name conflicts

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 23 Oct 2015 15:37:53 +0200

libpappsomspp (0.2.2-2) jessie; urgency=medium

  * U amino acid taken into account

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 23 Oct 2015 13:08:17 +0200

libpappsomspp (0.2.2-1) jessie; urgency=medium

  * XIC detection API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 16 Oct 2015 14:12:09 +0200

libpappsomspp (0.2.0-2) jessie; urgency=medium

  * new peptide and spectrum API

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Sat, 03 Oct 2015 23:17:10 +0200

libpappsomspp (0.2.0-1) jessie; urgency=medium

  * new API to digest and modify peptides

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 30 Sep 2015 10:03:45 +0200

libpappsomspp (0.1.0-2) jessie; urgency=medium

  * better API to handle phospho loss

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 14 Sep 2015 19:34:50 +0200

libpappsomspp (0.1.0-1) jessie; urgency=medium

  * better MS fragment ion support

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 10 Sep 2015 22:32:02 +0200

libpappsomspp (0.0.4-3) jessie; urgency=medium

  * get PSI MOD name

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 04 Sep 2015 17:09:35 +0200

libpappsomspp (0.0.4-2) jessie; urgency=medium

  * new getter to access obo term list

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 04 Sep 2015 16:26:52 +0200

libpappsomspp (0.0.4-1) jessie; urgency=medium

  * new peptide parser using aa modifications

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 03 Sep 2015 14:29:53 +0200

libpappsomspp (0.0.3-3) jessie; urgency=medium

  * library informations added in debian package (symbols, shlibs)

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 19 Aug 2015 22:56:54 +0200

libpappsomspp (0.0.3-2) jessie; urgency=medium

  * little fix

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Wed, 19 Aug 2015 16:38:26 +0200

libpappsomspp (0.0.3-1) jessie; urgency=medium

  * grouping functions OK

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Tue, 18 Aug 2015 10:53:35 +0200

libpappsomspp (0.0.2-1) jessie; urgency=medium

  * first good package... I hope

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 12 Jun 2015 08:58:19 +0200

libpappsomspp (0.0.1-5) jessie; urgency=medium

  * fix package concurency problem

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 11 Jun 2015 15:26:37 +0200

libpappsomspp (0.0.1-4) jessie; urgency=medium

  * double Debian package for Qt4 and Qt5

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Thu, 11 Jun 2015 15:18:33 +0200

libpappsomspp (0.0.1-3) jessie; urgency=medium

  * cmake module added to dev package

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 29 May 2015 16:08:52 +0200

libpappsomspp (0.0.1-2) jessie; urgency=medium

  * first Debian Jessie package

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Fri, 29 May 2015 15:09:46 +0200

libpappsomspp (0.0.1-1) wheezy; urgency=low

  * first debian package

 -- Olivier Langella <Olivier.Langella@moulon.inra.fr>  Mon, 16 Mar 2015 14:06:18 +0100

